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  5. Brara.B02520.1

Brara.B02520.1


Description : component *(mS78/mS79) of small mitoribosomal-subunit proteome


Gene families : OG_42_0001076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001076_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B02520.1
Cluster HCAA Clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Bradi3g49480 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G059290.1 No alias component *(mL103) of large mitoribosomal-subunit... 0.03 Orthogroups_2024-Update
Potri.007G028400 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Sobic.004G223800.1 No alias component *(mL103) of large mitoribosomal-subunit... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 107 132
IPR002885 Pentatricopeptide_repeat 171 219
IPR002885 Pentatricopeptide_repeat 275 319
No external refs found!