1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.B02562.1

Brara.B02562.1


Description : E3 ubiquitin ligase *(BRH)


Gene families : OG_42_0000206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B02562.1
Cluster HCAA Clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G009100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G002690.1 No alias Unknown function 0.04 Orthogroups_2024-Update
evm.model.contig_2500.15 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 70 114
No external refs found!