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  5. Brara.B02782.1

Brara.B02782.1


Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer


Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B02782.1
Cluster HCAA Clusters: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
186992 No alias tubulin beta 8 0.02 Orthogroups_2024-Update
79202 No alias tubulin beta chain 2 0.01 Orthogroups_2024-Update
GRMZM2G108766 No alias tubulin beta 8 0.03 Orthogroups_2024-Update
Glyma.15G132200 No alias tubulin beta 8 0.04 Orthogroups_2024-Update
Glyma.20G159200 No alias tubulin beta 8 0.04 Orthogroups_2024-Update
HORVU1Hr1G064870.3 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
HORVU3Hr1G078940.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Kfl00215_0220 kfl00215_0220_v1.1 (p04690|tbb_chlre : 826.0) Tubulin beta-1/beta-2 chain -... 0.02 Orthogroups_2024-Update
Mp1g20730.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Mp2g16780.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
PSME_00027607-RA No alias (at5g62700 : 563.0) encodes tubulin beta-2/beta-3 chain;... 0.02 Orthogroups_2024-Update
Potri.002G021800 No alias tubulin beta-5 chain 0.04 Orthogroups_2024-Update
Potri.016G033200 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
Pp1s252_90V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Pp1s93_136V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Pp1s93_158V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Seita.4G265500.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.06 Orthogroups_2024-Update
Sopen10g031450 No alias Tubulin/FtsZ family, GTPase domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!