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  5. Brara.B02813.1

Brara.B02813.1


Description : E3 ubiquitin ligase *(BRG)


Gene families : OG_42_0000224 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000224_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B02813.1
Cluster HCAA Clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
At3g12920 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.03 Orthogroups_2024-Update
Bradi5g08790 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
Brara.A02592.1 No alias E3 ubiquitin ligase *(BRG) 0.03 Orthogroups_2024-Update
GRMZM2G035821 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
Glyma.04G003600 No alias SBP (S-ribonuclease binding protein) family protein 0.04 Orthogroups_2024-Update
Glyma.09G019900 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
Potri.014G027000 No alias S-ribonuclease binding protein 1 0.02 Orthogroups_2024-Update
Potri.015G118000 No alias SBP (S-ribonuclease binding protein) family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!