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  5. Brara.B02826.1

Brara.B02826.1


Description : EC_3.2 glycosylase & BZR-type transcription factor


Gene families : OG_42_0000277 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B02826.1
Cluster HCAA Clusters: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Bradi1g18390 No alias beta-amylase 3 0.03 Orthogroups_2024-Update
GRMZM5G803981 No alias beta-amylase 5 0.02 Orthogroups_2024-Update
MA_3193g0010 No alias (at4g17090 : 662.0) Encodes a beta-amylase targeted to... 0.03 Orthogroups_2024-Update
Mp8g10500.1 No alias beta amylase 0.02 Orthogroups_2024-Update
PSME_00052840-RA No alias (at3g23920 : 360.0) Encodes a chloroplast beta-amylase.... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA 16Dec
MF GO:0016161 beta-amylase activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004357 glutamate-cysteine ligase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR008540 BES1_N 100 247
IPR001554 Glyco_hydro_14 277 673
No external refs found!