Brara.B02887.1

Description : WRKY-type transcription factor

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.B02887.1
Cluster	HCAA Clusters: Cluster_135

Target	Alias	Description	ECC score	Gene Family Method
At2g40750	No alias	Probable WRKY transcription factor 54...	0.03	Orthogroups_2024-Update
At2g47260	No alias	Probable WRKY transcription factor 23...	0.03	Orthogroups_2024-Update
Brara.B01850.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I00100.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G398506	No alias	WRKY family transcription factor family protein	0.02	Orthogroups_2024-Update
HORVU1Hr1G088300.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os04g39570	No alias	WRKY35, expressed	0.03	Orthogroups_2024-Update
Mp4g00200.1	No alias	transcription factor (WRKY)	0.02	Orthogroups_2024-Update
PSME_00021156-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00039003-RA	No alias	(at1g29860 : 112.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00047222-RA	No alias	(at4g04450 : 178.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00049648-RA	No alias	(at1g62300 : 176.0) Encodes a transcription factor...	0.02	Orthogroups_2024-Update
Potri.005G085200	No alias	WRKY DNA-binding protein 51	0.04	Orthogroups_2024-Update
Pp1s39_217V6	No alias	wrky transcription	0.03	Orthogroups_2024-Update
Seita.3G054500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G365500.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G227300.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.008G029400.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G212800.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sopen07g024390	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003872	6-phosphofructokinase activity	IEP	Predicted GO
MF	GO:0008443	phosphofructokinase activity	IEP	Predicted GO
BP	GO:0016053	organic acid biosynthetic process	IEP	Predicted GO
MF	GO:0016790	thiolester hydrolase activity	IEP	Predicted GO
MF	GO:0019200	carbohydrate kinase activity	IEP	Predicted GO
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Predicted GO
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	180	237

External Links

No external refs found!

Brara.B02887.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation