1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.B02900.1

Brara.B02900.1


Description : Unknown function


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B02900.1
Cluster HCAA Clusters: Cluster_397

Target Alias Description ECC score Gene Family Method Actions
A4A49_09076 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
A4A49_16559 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
A4A49_18484 No alias tmv resistance protein n 0.04 Orthogroups_2024-Update
A4A49_32821 No alias tmv resistance protein n 0.02 Orthogroups_2024-Update
A4A49_34609 No alias tmv resistance protein n 0.04 Orthogroups_2024-Update
At1g64070 No alias Disease resistance protein RML1A... 0.03 Orthogroups_2024-Update
At1g72920 No alias Similar to part of disease resistance protein... 0.02 Orthogroups_2024-Update
At3g04220 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.04 Orthogroups_2024-Update
At5g17680 No alias Disease resistance protein (TIR-NBS-LRR class)... 0.05 Orthogroups_2024-Update
At5g17970 No alias Disease resistance protein [Source:UniProtKB/TrEMBL;Acc:Q9FJG4] 0.03 Orthogroups_2024-Update
At5g22690 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
At5g38350 No alias Disease resistance protein (NBS-LRR class) family... 0.03 Orthogroups_2024-Update
At5g40100 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.04 Orthogroups_2024-Update
At5g48780 No alias Disease resistance protein (TIR-NBS class)... 0.03 Orthogroups_2024-Update
At5g51630 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.04 Orthogroups_2024-Update
Brara.B00766.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.B02820.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B02893.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B02901.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.F01652.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G03158.1 No alias effector receptor *(NLR) 0.04 Orthogroups_2024-Update
Brara.G03299.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.J01787.1 No alias effector receptor *(NLR) 0.04 Orthogroups_2024-Update
Brara.J02631.1 No alias effector receptor *(NLR) 0.02 Orthogroups_2024-Update
Glyma.02G041800 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.01 Orthogroups_2024-Update
Glyma.02G076900 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.02G077000 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.03G053500 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.06G259800 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.09G075500 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.10G184300 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.11G153000 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.12G132000 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.12G132400 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.13G076200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.16G085700 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.16G118600 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.16G135500 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.16G215300 No alias transmembrane receptors;ATP binding 0.05 Orthogroups_2024-Update
Glyma.18G116601 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.U033205 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
MA_294581g0010 No alias (at5g36930 : 97.4) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00041991-RA No alias (at1g27180 : 111.0) disease resistance protein... 0.03 Orthogroups_2024-Update
Potri.002G056100 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.003G014200 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Potri.007G143300 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Potri.011G009400 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Potri.011G011900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.012G135700 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Potri.014G063500 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.T037800 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.T073800 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.05 Orthogroups_2024-Update
Potri.T077200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Potri.T077532 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.T112700 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.T129400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Pp1s226_63V6 No alias tir-nbs-lrr resistance protein 0.02 Orthogroups_2024-Update
Solyc01g102850 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.02 Orthogroups_2024-Update
Solyc06g065150 No alias Disease resistance protein N-like protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc08g005510 No alias disease resistance protein (TIR-NBS-LRR class) (AHRD... 0.03 Orthogroups_2024-Update
Solyc12g097000 No alias TIR-NBS-LRR class disease resistance protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen01g045290 No alias NB-ARC domain 0.02 Orthogroups_2024-Update
Sopen02g010920 No alias NB-ARC domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA 16Dec
MF GO:0043531 ADP binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0008285 negative regulation of cell proliferation IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0042127 regulation of cell proliferation IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 224 430
IPR000157 TIR_dom 20 179
No external refs found!