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  5. Brara.B02917.1

Brara.B02917.1


Description : PLATZ-type transcription factor


Gene families : OG_42_0000211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B02917.1
Cluster HCAA Clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
A4A49_14799 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Brara.G00556.1 No alias PLATZ-type transcription factor 0.04 Orthogroups_2024-Update
PSME_00037553-RA No alias (at1g21000 : 238.0) PLATZ transcription factor family... 0.02 Orthogroups_2024-Update
Potri.003G092800 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
Pp1s441_8V6 No alias zinc ion binding 0.03 Orthogroups_2024-Update
Seita.5G187400.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Seita.7G218800.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006734 DUF597 69 142
No external refs found!