Brara.B02952.1

Description : subgroup ERF-IX transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.B02952.1
Cluster	HCAA Clusters: Cluster_105

Target	Alias	Description	ECC score	Gene Family Method
A4A49_15089	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
A4A49_39806	No alias	ethylene-responsive transcription factor erf119	0.04	Orthogroups_2024-Update
At1g12630	No alias	Ethylene-responsive transcription factor ERF027...	0.03	Orthogroups_2024-Update
At1g21910	No alias	DREB26 [Source:UniProtKB/TrEMBL;Acc:A0A178W3Q9]	0.06	Orthogroups_2024-Update
At1g22190	No alias	Ethylene-responsive transcription factor RAP2-13...	0.05	Orthogroups_2024-Update
At3g50260	No alias	Ethylene-responsive transcription factor ERF011...	0.02	Orthogroups_2024-Update
At4g17500	No alias	Ethylene-responsive transcription factor 1A...	0.03	Orthogroups_2024-Update
At5g44210	No alias	Ethylene-responsive transcription factor 9...	0.02	Orthogroups_2024-Update
At5g61590	No alias	Ethylene-responsive transcription factor ERF107...	0.04	Orthogroups_2024-Update
Bradi1g72449	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi2g29960	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi2g56145	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.E02969.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Brara.I00021.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.I02949.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.I05089.1	No alias	subgroup ERF-VIII transcription factor	0.01	Orthogroups_2024-Update
Brara.K00718.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
GRMZM2G039112	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
GRMZM2G068967	No alias	ethylene response factor 7	0.02	Orthogroups_2024-Update
GRMZM2G111415	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.02G039300	No alias	DORNROSCHEN-like	0.03	Orthogroups_2024-Update
Glyma.04G062900	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.06G068800	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.06G105000	No alias	related to AP2 4	0.03	Orthogroups_2024-Update
Glyma.06G295300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.08G137600	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.08G216600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.08G320700	No alias	ethylene responsive element binding factor 3	0.02	Orthogroups_2024-Update
Glyma.10G119100	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.12G117000	No alias	erf domain protein 9	0.03	Orthogroups_2024-Update
Glyma.20G197000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.20G203500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G055710.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
HORVU2Hr1G103660.2	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU4Hr1G077360.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
LOC_Os05g37640	No alias	expressed protein	0.03	Orthogroups_2024-Update
MA_65877g0010	No alias	(at3g16280 : 101.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
MA_69434g0020	No alias	(q40479\|erf2_tobac : 84.0) Ethylene-responsive...	0.03	Orthogroups_2024-Update
MA_8552524g0010	No alias	(q9lw50\|erf2_nicsy : 135.0) Ethylene-responsive...	0.03	Orthogroups_2024-Update
Mp7g00860.1	No alias	transcription factor (DREB)	0.02	Orthogroups_2024-Update
PSME_00016017-RA	No alias	(at5g25190 : 150.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00046682-RA	No alias	(at3g16770 : 96.3) Encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
PSME_00051454-RA	No alias	(at1g19210 : 98.6) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Potri.006G069400	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.006G138800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s21_247V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s335_8V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G027200.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.2G156100.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Seita.4G016400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.4G041600.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.02	Orthogroups_2024-Update
Seita.7G188500.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Seita.7G262800.1	No alias	subgroup ERF-II-DEAR transcription factor	0.04	Orthogroups_2024-Update
Sobic.002G081300.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Sobic.002G184400.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G319700.1	No alias	Unknown function	0.01	Orthogroups_2024-Update
Sopen03g041270	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen04g027740	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen05g005260	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen06g022520	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen07g024840	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen07g028150	No alias	AP2 domain	0.05	Orthogroups_2024-Update
Sopen12g022660	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Predicted GO
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Predicted GO
BP	GO:0000272	polysaccharide catabolic process	IEP	Predicted GO
BP	GO:0001932	regulation of protein phosphorylation	IEP	Predicted GO
MF	GO:0005244	voltage-gated ion channel activity	IEP	Predicted GO
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Predicted GO
MF	GO:0005253	anion channel activity	IEP	Predicted GO
MF	GO:0005254	chloride channel activity	IEP	Predicted GO
BP	GO:0006821	chloride transport	IEP	Predicted GO
MF	GO:0008289	lipid binding	IEP	Predicted GO
MF	GO:0008308	voltage-gated anion channel activity	IEP	Predicted GO
BP	GO:0009116	nucleoside metabolic process	IEP	Predicted GO
BP	GO:0010215	cellulose microfibril organization	IEP	Predicted GO
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015108	chloride transmembrane transporter activity	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016161	beta-amylase activity	IEP	Predicted GO
MF	GO:0019900	kinase binding	IEP	Predicted GO
MF	GO:0019901	protein kinase binding	IEP	Predicted GO
MF	GO:0022832	voltage-gated channel activity	IEP	Predicted GO
BP	GO:0030198	extracellular matrix organization	IEP	Predicted GO
BP	GO:0042325	regulation of phosphorylation	IEP	Predicted GO
BP	GO:0043062	extracellular structure organization	IEP	Predicted GO
BP	GO:0043549	regulation of kinase activity	IEP	Predicted GO
BP	GO:0045859	regulation of protein kinase activity	IEP	Predicted GO
BP	GO:0051338	regulation of transferase activity	IEP	Predicted GO
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Predicted GO
MF	GO:1901567	fatty acid derivative binding	IEP	Predicted GO
BP	GO:1901657	glycosyl compound metabolic process	IEP	Predicted GO
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	123	173

External Links

No external refs found!

Brara.B02952.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation