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  5. Brara.B02987.1

Brara.B02987.1


Description : pectin methylesterase


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.B02987.1
Cluster HCAA Clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
A4A49_28049 No alias putative pectinesterase 8 0.03 Orthogroups_2024-Update
Mp5g03920.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Mp5g03930.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Pp1s55_167V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.003G143600.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA 16Dec
BP GO:0042545 cell wall modification IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
CC GO:0009317 acetyl-CoA carboxylase complex IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 61 353
No external refs found!