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  5. Brara.B02992.1

Brara.B02992.1


Description : di-/tricarboxylate transporter *(TDT)


Gene families : OG_42_0003780 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003780_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B02992.1
Cluster HCAA Clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Brara.I01997.1 No alias di-/tricarboxylate transporter *(TDT) 0.03 Orthogroups_2024-Update
Seita.2G251700.1 No alias di-/tricarboxylate transporter *(TDT) 0.03 Orthogroups_2024-Update
Sobic.002G245300.1 No alias di-/tricarboxylate transporter *(TDT) 0.02 Orthogroups_2024-Update
Sobic.002G245400.1 No alias di-/tricarboxylate transporter *(TDT) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0022857 transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR001898 SLC13A/DASS 2 449
No external refs found!