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  5. Brara.B03010.1

Brara.B03010.1


Description : GARP subgroup PHL transcription factor


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03010.1
Cluster HCAA Clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AC234155.1_FG002 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
At3g24120 No alias Homeodomain-like superfamily protein [Source:TAIR;Acc:AT3G24120] 0.04 Orthogroups_2024-Update
Bradi1g63530 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G123000 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G054450.1 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
LOC_Os03g55760 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g47890 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g41240 No alias Myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os07g25710 No alias myb-like DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_138039g0010 No alias (at1g32240 : 147.0) Encodes a member of the KANADI... 0.02 Orthogroups_2024-Update
Mp3g04970.1 No alias G2-like GARP transcription factor 0.02 Orthogroups_2024-Update
Mp4g08700.1 No alias G2-like GARP transcription factor 0.03 Orthogroups_2024-Update
PSME_00036264-RA No alias (at5g29000 : 213.0) Homeodomain-like superfamily... 0.02 Orthogroups_2024-Update
Pp1s12_156V6 No alias MUJ8.2; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.3G195600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G199300.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Seita.4G185800.1 No alias GARP subgroup PHL transcription factor & regulatory... 0.02 Orthogroups_2024-Update
Sobic.008G149650.1 No alias KANADI-type transcription factor 0.02 Orthogroups_2024-Update
Solyc11g022470 No alias Myb family transcription factor family protein (AHRD... 0.02 Orthogroups_2024-Update
Sopen06g021670 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
evm.model.contig_4486.1 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0004860 protein kinase inhibitor activity IEP Predicted GO
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019210 kinase inhibitor activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 18 68
IPR025756 Myb_CC_LHEQLE 101 147
No external refs found!