Brara.B03096.1


Description : Unknown function


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03096.1
Cluster HCAA Clusters: Cluster_362

Target Alias Description ECC score Gene Family Method Actions
At2g02340 No alias Putative F-box protein PP2-B8... 0.02 Orthogroups_2024-Update
Bradi1g00970 No alias phloem protein 2-B10 0.02 Orthogroups_2024-Update
Bradi3g17208 No alias phloem protein 2-B10 0.03 Orthogroups_2024-Update
Brara.F03423.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.03G233900 No alias phloem protein 2-B15 0.03 Orthogroups_2024-Update
Glyma.10G169300 No alias phloem protein 2-B10 0.04 Orthogroups_2024-Update
Glyma.14G073300 No alias phloem protein 2-B10 0.05 Orthogroups_2024-Update
HORVU6Hr1G089430.2 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_22084g0010 No alias (at2g02240 : 194.0) maternal effect embryo arrest 66... 0.03 Orthogroups_2024-Update
MA_227118g0010 No alias (at2g02340 : 82.4) phloem protein 2-B8 (PP2-B8);... 0.03 Orthogroups_2024-Update
PSME_00050854-RA No alias (at2g02240 : 154.0) maternal effect embryo arrest 66... 0.03 Orthogroups_2024-Update
Seita.6G062100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G063500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G060500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G341100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc11g006740 No alias F-box protein PP2 (AHRD V3.3 *** A0A059PC27_CICAR) 0.03 Orthogroups_2024-Update
Solyc12g098190 No alias F-box family protein (AHRD V3.3 *** AT2G02240.1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Type GO Term Name Evidence Source
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 108 270
IPR001810 F-box_dom 18 59
No external refs found!