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  5. Brara.B03100.1

Brara.B03100.1


Description : Unknown function


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03100.1
Cluster HCAA Clusters: Cluster_397

Target Alias Description ECC score Gene Family Method Actions
At1g33920 No alias Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4... 0.04 Orthogroups_2024-Update
Bradi3g15160 No alias phloem protein 2-B1 0.02 Orthogroups_2024-Update
Bradi3g17208 No alias phloem protein 2-B10 0.04 Orthogroups_2024-Update
Bradi3g54993 No alias phloem protein 2-B2 0.03 Orthogroups_2024-Update
Brara.F03423.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.03G233800 No alias phloem protein 2-B15 0.02 Orthogroups_2024-Update
Glyma.07G222500 No alias phloem protein 2-A1 0.02 Orthogroups_2024-Update
MA_22084g0010 No alias (at2g02240 : 194.0) maternal effect embryo arrest 66... 0.02 Orthogroups_2024-Update
MA_413510g0010 No alias (at1g09155 : 172.0) phloem protein 2-B15 (PP2-B15);... 0.02 Orthogroups_2024-Update
PSME_00025236-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00043920-RA No alias (at1g09155 : 152.0) phloem protein 2-B15 (PP2-B15);... 0.02 Orthogroups_2024-Update
PSME_00050415-RA No alias (at1g80110 : 126.0) phloem protein 2-B11 (PP2-B11);... 0.02 Orthogroups_2024-Update
PSME_00050854-RA No alias (at2g02240 : 154.0) maternal effect embryo arrest 66... 0.03 Orthogroups_2024-Update
PSME_00052353-RA No alias (at2g02230 : 141.0) phloem protein 2-B1 (PP2-B1);... 0.04 Orthogroups_2024-Update
Potri.013G012600 No alias phloem protein 2-B15 0.04 Orthogroups_2024-Update
Sobic.005G119100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc12g044930 No alias F-box family protein (AHRD V3.3 *** AT2G02240.1) 0.02 Orthogroups_2024-Update
Solyc12g096890 No alias F-box protein PP2 (AHRD V3.3 *** A0A059PC27_CICAR) 0.03 Orthogroups_2024-Update
Solyc12g098190 No alias F-box family protein (AHRD V3.3 *** AT2G02240.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0008285 negative regulation of cell proliferation IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0042127 regulation of cell proliferation IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 77 119
IPR025886 PP2-like 166 331
No external refs found!