1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.B03101.1

Brara.B03101.1


Description : Unknown function


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03101.1
Cluster HCAA Clusters: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
At5g45080 No alias Protein PHLOEM PROTEIN 2-LIKE A6... 0.03 Orthogroups_2024-Update
Bradi3g15160 No alias phloem protein 2-B1 0.03 Orthogroups_2024-Update
Bradi3g17208 No alias phloem protein 2-B10 0.05 Orthogroups_2024-Update
Bradi3g55020 No alias phloem protein 2-B1 0.03 Orthogroups_2024-Update
Glyma.03G233900 No alias phloem protein 2-B15 0.03 Orthogroups_2024-Update
MA_992082g0010 No alias (at2g02240 : 166.0) maternal effect embryo arrest 66... 0.04 Orthogroups_2024-Update
Mp3g22930.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
PSME_00034035-RA No alias (at4g19850 : 81.3) encodes a protein similar to phloem... 0.05 Orthogroups_2024-Update
PSME_00043920-RA No alias (at1g09155 : 152.0) phloem protein 2-B15 (PP2-B15);... 0.03 Orthogroups_2024-Update
PSME_00050415-RA No alias (at1g80110 : 126.0) phloem protein 2-B11 (PP2-B11);... 0.05 Orthogroups_2024-Update
Seita.1G361200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G231200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc12g098190 No alias F-box family protein (AHRD V3.3 *** AT2G02240.1) 0.04 Orthogroups_2024-Update
Sopen02g018100 No alias Phloem protein 2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 116 282
IPR001810 F-box_dom 29 67
No external refs found!