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  5. Brara.B03140.1

Brara.B03140.1


Description : T2-type RNase *(RNS)


Gene families : OG_42_0000815 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000815_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03140.1
Cluster HCAA Clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
A4A49_20361 No alias extracellular ribonuclease le 0.03 Orthogroups_2024-Update
At2g02990 No alias Ribonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:P42813] 0.06 Orthogroups_2024-Update
Bradi1g20520 No alias ribonuclease 1 0.05 Orthogroups_2024-Update
LOC_Os08g33710 No alias ribonuclease T2 family domain containing protein, expressed 0.05 Orthogroups_2024-Update
MA_8445917g0010 No alias (at2g02990 : 251.0) member of the ribonuclease T2... 0.03 Orthogroups_2024-Update
PSME_00036681-RA No alias (at1g26820 : 260.0) Encodes ribonuclease RNS3.;... 0.03 Orthogroups_2024-Update
PSME_00038099-RA No alias (at2g02990 : 167.0) member of the ribonuclease T2... 0.03 Orthogroups_2024-Update
PSME_00047354-RA No alias (at1g26820 : 242.0) Encodes ribonuclease RNS3.;... 0.02 Orthogroups_2024-Update
Potri.008G086700 No alias ribonuclease 1 0.03 Orthogroups_2024-Update
Potri.008G086800 No alias ribonuclease 3 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
MF GO:0033897 ribonuclease T2 activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015996 chlorophyll catabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0047746 chlorophyllase activity IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR001568 RNase_T2-like 29 212
No external refs found!