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  5. Brara.B03159.1

Brara.B03159.1


Description : GARP subgroup HHO transcription factor


Gene families : OG_42_0001745 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001745_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03159.1
Cluster HCAA Clusters: Cluster_360

Target Alias Description ECC score Gene Family Method Actions
Bradi2g04810 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.H02611.1 No alias GARP subgroup HHO transcription factor & transcriptional... 0.04 Orthogroups_2024-Update
Brara.I02158.1 No alias GARP subgroup HHO transcription factor & transcriptional... 0.03 Orthogroups_2024-Update
Seita.1G146600.1 No alias GARP subgroup HHO transcription factor 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 225 276
No external refs found!