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  5. Brara.B03183.1

Brara.B03183.1


Description : Unknown function


Gene families : OG_42_0001749 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001749_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.B03183.1
Cluster HCAA Clusters: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
236852 No alias photosystem II reaction center protein A 0.03 Orthogroups_2024-Update
Bradi4g19720 No alias photosystem II reaction center protein A 0.03 Orthogroups_2024-Update
Bradi5g10967 No alias photosystem II reaction center protein A 0.03 Orthogroups_2024-Update
GRMZM5G844143 No alias photosystem II reaction center protein A 0.02 Orthogroups_2024-Update
HORVU0Hr1G024720.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G121700.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G121820.5 No alias component *(PsbA/D1) of PS-II reaction center complex 0.02 Orthogroups_2024-Update
HORVU5Hr1G004630.2 No alias component *(PsbA/D1) of PS-II reaction center complex 0.02 Orthogroups_2024-Update
HORVU6Hr1G046820.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os08g35420 No alias photosynthetic reaction center protein, putative, expressed 0.03 Orthogroups_2024-Update
Mp3g12650.1 No alias Photosystem II protein D1 OS=Marchantia polymorpha... 0.01 Orthogroups_2024-Update
Mp8g01990.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
PSME_00003759-RA No alias (p69551|psba_pinth : 308.0) Photosystem Q(B) protein (32... 0.05 Orthogroups_2024-Update
PSME_00021857-RA No alias (p69551|psba_pinth : 509.0) Photosystem Q(B) protein (32... 0.05 Orthogroups_2024-Update
Seita.J017900.1 No alias component *(PsbA/D1) of PS-II reaction center complex 0.04 Orthogroups_2024-Update
Solyc01g048590 No alias LOW QUALITY:Photosystem II protein D1 (AHRD V3.3 *-* PSBA_CHLVU) 0.05 Orthogroups_2024-Update
Solyc02g011990 No alias Photosystem II protein D1 (AHRD V3.3 *** F1KC16_9ASTE) 0.02 Orthogroups_2024-Update
Sopen01g008050 No alias Photosynthetic reaction centre protein 0.03 Orthogroups_2024-Update
Sopen02g002740 No alias Photosynthetic reaction centre protein 0.05 Orthogroups_2024-Update
evm.model.contig_556.1 No alias (p06402|psba_marpo : 577.0) Photosystem Q(B) protein (32... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009772 photosynthetic electron transport in photosystem II IEA 16Dec
BP GO:0019684 photosynthesis, light reaction IEA 16Dec
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000484 Photo_RC_L/M 1 115
No external refs found!