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  5. Brara.B03240.1

Brara.B03240.1


Description : tonoplast intrinsic protein *(TIP)


Gene families : OG_42_0000183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03240.1
Cluster HCAA Clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
165030 No alias tonoplast intrinsic protein 2;3 0.05 Orthogroups_2024-Update
At3g16240 No alias Aquaporin TIP2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q41951] 0.04 Orthogroups_2024-Update
Brara.D02239.1 No alias tonoplast intrinsic protein *(TIP) 0.03 Orthogroups_2024-Update
HORVU7Hr1G081770.1 No alias tonoplast intrinsic protein *(TIP) 0.03 Orthogroups_2024-Update
Mp1g04200.1 No alias tonoplast intrinsic protein (TIP) 0.02 Orthogroups_2024-Update
Mp6g11740.1 No alias tonoplast intrinsic protein (TIP) 0.02 Orthogroups_2024-Update
Mp6g11790.1 No alias tonoplast intrinsic protein (TIP) 0.02 Orthogroups_2024-Update
Potri.004G216500 No alias gamma tonoplast intrinsic protein 0.02 Orthogroups_2024-Update
Potri.006G121700 No alias gamma tonoplast intrinsic protein 0.03 Orthogroups_2024-Update
Pp1s156_153V6 No alias mip tip subfamily 0.02 Orthogroups_2024-Update
Seita.4G160700.1 No alias tonoplast intrinsic protein *(TIP) 0.02 Orthogroups_2024-Update
Solyc08g066840 No alias tonoplast intrinsic protein 4.1 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 15 235
No external refs found!