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  5. Brara.B03273.1

Brara.B03273.1


Description : substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0000475 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000475_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03273.1
Cluster HCAA Clusters: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
At1g14330 No alias At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9] 0.03 Orthogroups_2024-Update
At3g27150 No alias F-box/kelch-repeat protein At3g27150... 0.03 Orthogroups_2024-Update
Brara.F01977.1 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex 0.05 Orthogroups_2024-Update
Brara.I02068.1 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Glyma.05G077700 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G090600 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Orthogroups_2024-Update
Mp5g08380.1 No alias F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.03 Orthogroups_2024-Update
Potri.017G069500 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Orthogroups_2024-Update
Seita.8G180800.1 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Sobic.004G236600.4 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006652 Kelch_1 242 286
IPR006652 Kelch_1 194 239
No external refs found!