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  5. Brara.B03309.1

Brara.B03309.1


Description : RBR-Ariadne-class E3 ubiquitin ligase


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03309.1
Cluster HCAA Clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
At2g31770 No alias Probable E3 ubiquitin-protein ligase ARI9... 0.03 Orthogroups_2024-Update
At3g27710 No alias Probable E3 ubiquitin-protein ligase ARI3... 0.03 Orthogroups_2024-Update
Bradi1g14391 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g14425 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g14430 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.B03864.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Mp2g15500.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
evm.model.contig_4402.6 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004659 prenyltransferase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 191 253
No external refs found!