1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.B03323.1

Brara.B03323.1


Description : Unknown function


Gene families : OG_42_0000195 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03323.1
Cluster HCAA Clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
A4A49_16870 No alias protein trichome birefringence-like 19 0.03 Orthogroups_2024-Update
At1g70230 No alias TBL27 [Source:UniProtKB/TrEMBL;Acc:A0A178WG99] 0.03 Orthogroups_2024-Update
At3g28150 No alias Protein ALTERED XYLOGLUCAN 4-like... 0.03 Orthogroups_2024-Update
Bradi2g32220 No alias TRICHOME BIREFRINGENCE-LIKE 26 0.03 Orthogroups_2024-Update
Brara.A01536.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J00049.1 No alias mannan O-acetyltransferase *(MOAT) 0.03 Orthogroups_2024-Update
GRMZM2G305439 No alias TRICHOME BIREFRINGENCE-LIKE 21 0.02 Orthogroups_2024-Update
Glyma.01G034300 No alias TRICHOME BIREFRINGENCE-LIKE 27 0.02 Orthogroups_2024-Update
Glyma.02G031100 No alias TRICHOME BIREFRINGENCE-LIKE 27 0.03 Orthogroups_2024-Update
HORVU3Hr1G058830.3 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g49660 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os06g12800 No alias expressed protein 0.02 Orthogroups_2024-Update
Potri.002G168400 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.04 Orthogroups_2024-Update
Potri.004G105600 No alias TRICHOME BIREFRINGENCE-LIKE 19 0.03 Orthogroups_2024-Update
Potri.011G144100 No alias TRICHOME BIREFRINGENCE-LIKE 22 0.03 Orthogroups_2024-Update
Seita.2G191400.1 No alias xyloglucan O-acetyltransferase *(AXY4) 0.02 Orthogroups_2024-Update
Seita.4G103800.1 No alias xyloglucan O-acetyltransferase *(AXY4) 0.01 Orthogroups_2024-Update
Solyc03g046270 No alias Trichome birefringence-like 19 (AHRD V3.3 *** A0A061EH35_THECC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 68 120
IPR026057 PC-Esterase 121 407
No external refs found!