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  5. Brara.B03324.1

Brara.B03324.1


Description : Unknown function


Gene families : OG_42_0000129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03324.1
Cluster HCAA Clusters: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
At5g03760 No alias RAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UH35] 0.03 Orthogroups_2024-Update
Brara.D00719.1 No alias EC_2.4 glycosyltransferase & mannan synthase *(CSLA) 0.03 Orthogroups_2024-Update
Glyma.08G222800 No alias Cellulose-synthase-like C5 0.04 Orthogroups_2024-Update
HORVU4Hr1G000610.1 No alias EC_2.4 glycosyltransferase & mannan synthase *(CSLA) 0.02 Orthogroups_2024-Update
HORVU7Hr1G092910.2 No alias EC_2.4 glycosyltransferase & mannan synthase *(CSLA) 0.04 Orthogroups_2024-Update
PSME_00054676-RA No alias (at4g31590 : 540.0) encodes a gene similar to cellulose... 0.03 Orthogroups_2024-Update
Potri.006G116900 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.02 Orthogroups_2024-Update
Sobic.003G308100.1 No alias 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Solyc10g083670 No alias Cellulose synthase-like protein (AHRD V3.3 *** L0ASI8_POPTO) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!