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  5. Brara.B03345.1

Brara.B03345.1


Description : MYB class-R2R3 subgroup-1 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03345.1
Cluster HCAA Clusters: Cluster_336

Target Alias Description ECC score Gene Family Method Actions
A4A49_03021 No alias transcription factor myb48 0.03 Orthogroups_2024-Update
A4A49_12286 No alias transcription factor myb30 0.03 Orthogroups_2024-Update
A4A49_19591 No alias myb-related protein myb4 0.04 Orthogroups_2024-Update
A4A49_35836 No alias transcription factor myb30 0.03 Orthogroups_2024-Update
At1g66230 No alias Transcription factor MYB20... 0.05 Orthogroups_2024-Update
At3g49690 No alias RAX3 [Source:UniProtKB/TrEMBL;Acc:A0A178VK29] 0.03 Orthogroups_2024-Update
Bradi2g11676 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
Bradi2g56520 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Bradi3g36660 No alias myb domain protein 106 0.02 Orthogroups_2024-Update
Bradi5g20130 No alias myb domain protein 63 0.04 Orthogroups_2024-Update
Brara.I01264.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G117244 No alias myb domain protein 68 0.02 Orthogroups_2024-Update
GRMZM2G701063 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Glyma.02G009800 No alias myb domain protein 2 0.03 Orthogroups_2024-Update
Glyma.03G163100 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.04G170100 No alias myb domain protein 94 0.05 Orthogroups_2024-Update
Glyma.04G205100 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
Glyma.09G261600 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Glyma.11G107100 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
Glyma.11G142900 No alias myb domain protein 48 0.05 Orthogroups_2024-Update
Glyma.14G069100 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.19G248100 No alias myb domain protein 15 0.04 Orthogroups_2024-Update
HORVU3Hr1G082210.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G054420.3 No alias MYB class-R2R3 subgroup-7 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g51260 No alias MYB family transcription factor, putative, expressed 0.06 Orthogroups_2024-Update
LOC_Os05g46610 No alias myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os05g48010 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10434028g0010 No alias (at1g68320 : 180.0) putative transcription factor:... 0.03 Orthogroups_2024-Update
MA_121533g0010 No alias (at5g57620 : 234.0) Encodes a putative transcription... 0.05 Orthogroups_2024-Update
MA_139924g0010 No alias (at4g38620 : 266.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
MA_22140g0010 No alias (at4g38620 : 249.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
MA_53373g0010 No alias (at3g13540 : 224.0) Encodes a member of the MYB family... 0.03 Orthogroups_2024-Update
MA_8147g0020 No alias (at1g22640 : 206.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
Mp3g07510.1 No alias transcription factor (MYB) 0.02 Orthogroups_2024-Update
PSME_00030815-RA No alias (at1g09540 : 235.0) Encodes putative transcription... 0.02 Orthogroups_2024-Update
PSME_00040054-RA No alias (at3g13890 : 229.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00041772-RA No alias (at5g15310 : 261.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00042064-RA No alias (p20026|myb1_horvu : 274.0) Myb-related protein Hv1 -... 0.02 Orthogroups_2024-Update
PSME_00052407-RA No alias (at4g09460 : 211.0) Encodes myb6 DNA-binding protein.;... 0.03 Orthogroups_2024-Update
PSME_00052883-RA No alias (p20026|myb1_horvu : 239.0) Myb-related protein Hv1 -... 0.03 Orthogroups_2024-Update
Potri.001G005100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Potri.004G088100 No alias myb domain protein 6 0.04 Orthogroups_2024-Update
Potri.004G138000 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Pp1s204_13V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s257_83V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s46_302V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Sobic.007G224800.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G112200.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Solyc11g073120 No alias R2R3MYB transcription factor 58 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 75 120
IPR001005 SANT/Myb 22 69
No external refs found!