Brara.B03351.1


Description : MYB class-R2R3 subgroup-21 transcription factor


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03351.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
At3g09370 No alias Myb domain protein 3r-3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSC6] 0.03 Orthogroups_2024-Update
At3g29020 No alias Myb domain protein 110 [Source:UniProtKB/TrEMBL;Acc:F4J1R5] 0.05 Orthogroups_2024-Update
At3g55730 No alias MYB transcription factor-like protein... 0.06 Orthogroups_2024-Update
At5g11050 No alias Transcription factor MYB64... 0.04 Orthogroups_2024-Update
Bradi2g28910 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Brara.A03530.1 No alias R1R2R3-MYB transcription factor 0.04 Orthogroups_2024-Update
Brara.C03283.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.04 Orthogroups_2024-Update
Brara.K00427.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Glyma.04G184200 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
Glyma.11G052100 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Glyma.14G086500 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Glyma.14G192600 No alias myb domain protein 64 0.03 Orthogroups_2024-Update
Glyma.16G072700 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
Glyma.19G118500 No alias myb domain protein 117 0.03 Orthogroups_2024-Update
HORVU1Hr1G029540.25 No alias R1R2R3-MYB transcription factor & mobile transcription... 0.02 Orthogroups_2024-Update
HORVU7Hr1G025720.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Kfl00026_0540 kfl00026_0540_v1.1 (at5g40360 : 115.0) putative transcription factor... 0.02 Orthogroups_2024-Update
LOC_Os05g38460 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g34960 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_9684426g0010 No alias (at4g37260 : 186.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00006895-RA No alias (at1g22640 : 178.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00025751-RA No alias (at3g50060 : 193.0) Encodes a member of the R2R3... 0.02 Orthogroups_2024-Update
Potri.003G123800 No alias Homeodomain-like protein 0.04 Orthogroups_2024-Update
Potri.005G118500 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
Potri.005G142600 No alias myb domain protein 73 0.02 Orthogroups_2024-Update
Potri.006G241700 No alias myb domain protein 3r-4 0.03 Orthogroups_2024-Update
Potri.007G134500 No alias myb domain protein 52 0.03 Orthogroups_2024-Update
Potri.012G039400 No alias myb domain protein 52 0.04 Orthogroups_2024-Update
Potri.014G035100 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Pp1s200_41V6 No alias F24J1.31; myb family transcription factor (MYB105)... 0.04 Orthogroups_2024-Update
Seita.4G205800.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.04 Orthogroups_2024-Update
Seita.9G054400.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G146500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen10g031820 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
evm.model.contig_4410.19 No alias (at5g02320 : 122.0) Encodes a putative c-MYB-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 111 155
IPR001005 SANT/Myb 58 105
No external refs found!