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  5. Brara.B03380.1

Brara.B03380.1


Description : transcriptional co-repressor *(AFP/NINJA)


Gene families : OG_42_0000789 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000789_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03380.1
Cluster HCAA Clusters: Cluster_360

Target Alias Description ECC score Gene Family Method Actions
At1g69260 No alias Ninja-family protein AFP1... 0.03 Orthogroups_2024-Update
At3g02140 No alias TMAC2 [Source:UniProtKB/TrEMBL;Acc:A0A178VMX2] 0.03 Orthogroups_2024-Update
Glyma.04G162100 No alias ABI five binding protein 3 0.04 Orthogroups_2024-Update
Seita.2G381600.1 No alias transcriptional co-repressor *(AFP/NINJA) 0.05 Orthogroups_2024-Update
Solyc02g030610 No alias Ninja-family protein (AHRD V3.3 *-* A0A1D1YDC3_9ARAE) 0.02 Orthogroups_2024-Update
Solyc02g032140 No alias Ninja-family protein (AHRD V3.3 *-* A0A199VX64_ANACO) 0.04 Orthogroups_2024-Update
Sopen05g007040 No alias Protein of unknown function (DUF1675) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR012463 Ninja_motif 40 75
IPR032310 NINJA_B 85 128
IPR032308 Jas 214 248
No external refs found!