Description : MADS/AGL-type transcription factor
Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.B03396.1 | |
Cluster | HCAA Clusters: Cluster_2 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At2g24840 | No alias | Agamous-like MADS-box protein AGL61... | 0.03 | Orthogroups_2024-Update | |
Bradi4g34680 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
LOC_Os06g06750 | No alias | OsMADS5 - MADS-box family gene with MIKCc type-box, expressed | 0.04 | Orthogroups_2024-Update | |
LOC_Os12g10540 | No alias | OsMADS13 - MADS-box family gene with MIKCc type-box, expressed | 0.03 | Orthogroups_2024-Update | |
Potri.009G079000 | No alias | AGAMOUS-like 44 | 0.03 | Orthogroups_2024-Update | |
Potri.015G098400 | No alias | AGAMOUS-like 19 | 0.03 | Orthogroups_2024-Update | |
Seita.4G163500.1 | No alias | MADS/AGL-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Sobic.002G258000.1 | No alias | regulatory protein *(SEPALLATA) of floral meristem... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | 16Dec |
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | 16Dec |
CC | GO:0005634 | nucleus | IEA | 16Dec |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | 16Dec |
MF | GO:0046983 | protein dimerization activity | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000723 | telomere maintenance | IEP | Predicted GO |
MF | GO:0003678 | DNA helicase activity | IEP | Predicted GO |
MF | GO:0004386 | helicase activity | IEP | Predicted GO |
MF | GO:0004525 | ribonuclease III activity | IEP | Predicted GO |
BP | GO:0006066 | alcohol metabolic process | IEP | Predicted GO |
MF | GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity | IEP | Predicted GO |
MF | GO:0008417 | fucosyltransferase activity | IEP | Predicted GO |
BP | GO:0016311 | dephosphorylation | IEP | Predicted GO |
BP | GO:0019751 | polyol metabolic process | IEP | Predicted GO |
MF | GO:0031127 | alpha-(1,2)-fucosyltransferase activity | IEP | Predicted GO |
BP | GO:0032200 | telomere organization | IEP | Predicted GO |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Predicted GO |
BP | GO:0042546 | cell wall biogenesis | IEP | Predicted GO |
BP | GO:0042592 | homeostatic process | IEP | Predicted GO |
BP | GO:0043647 | inositol phosphate metabolic process | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
BP | GO:0044282 | small molecule catabolic process | IEP | Predicted GO |
BP | GO:0046164 | alcohol catabolic process | IEP | Predicted GO |
BP | GO:0046174 | polyol catabolic process | IEP | Predicted GO |
BP | GO:0046434 | organophosphate catabolic process | IEP | Predicted GO |
BP | GO:0046838 | phosphorylated carbohydrate dephosphorylation | IEP | Predicted GO |
BP | GO:0046855 | inositol phosphate dephosphorylation | IEP | Predicted GO |
BP | GO:0060249 | anatomical structure homeostasis | IEP | Predicted GO |
BP | GO:0071545 | inositol phosphate catabolic process | IEP | Predicted GO |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Predicted GO |
BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | Predicted GO |
No external refs found! |