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  5. Brara.B03444.1

Brara.B03444.1


Description : regulatory protein (CIB) of blue light perception & bHLH-type transcription factor


Gene families : OG_42_0000125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03444.1
Cluster HCAA Clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Bradi4g19577 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Brara.C01506.1 No alias regulatory protein (CIB) of blue light perception &... 0.03 Orthogroups_2024-Update
GRMZM2G180452 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G049300 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os08g42470 No alias BEE 1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g25560 No alias BHLH transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00000014-RA No alias (at1g68920 : 227.0) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update
PSME_00019949-RA No alias (at1g68920 : 206.0) basic helix-loop-helix (bHLH)... 0.02 Orthogroups_2024-Update
Potri.002G100101 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s69_95V6 No alias dna binding protein 0.02 Orthogroups_2024-Update
Sobic.010G191100.2 No alias regulatory protein (CIB) of blue light perception &... 0.03 Orthogroups_2024-Update
Solyc03g113560 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily... 0.04 Orthogroups_2024-Update
Solyc06g072520 No alias bHLH transcription factor GBOF-1 0.02 Orthogroups_2024-Update
Sopen12g033380 No alias Helix-loop-helix DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0051382 kinetochore assembly IEP Predicted GO
BP GO:0051383 kinetochore organization IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 247 294
No external refs found!