Description : WRKY-type transcription factor
Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.B03501.1 | |
Cluster | HCAA Clusters: Cluster_198 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At1g30650 | No alias | Probable WRKY transcription factor 14... | 0.04 | Orthogroups_2024-Update | |
Bradi1g22680 | No alias | WRKY DNA-binding protein 3 | 0.03 | Orthogroups_2024-Update | |
Bradi4g30368 | No alias | WRKY DNA-binding protein 40 | 0.02 | Orthogroups_2024-Update | |
Brara.D00092.1 | No alias | WRKY-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Brara.D00225.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Cre04.g228400 | No alias | WRKY DNA-binding protein 26 | 0.01 | Orthogroups_2024-Update | |
GRMZM2G327349 | No alias | WRKY family transcription factor | 0.02 | Orthogroups_2024-Update | |
Glyma.02G020300 | No alias | WRKY DNA-binding protein 72 | 0.03 | Orthogroups_2024-Update | |
Glyma.03G176600 | No alias | WRKY family transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G067680.3 | No alias | WRKY-type transcription factor | 0.02 | Orthogroups_2024-Update | |
PSME_00033789-RA | No alias | (at2g38470 : 152.0) Member of the plant WRKY... | 0.03 | Orthogroups_2024-Update | |
PSME_00036210-RA | No alias | (at1g62300 : 137.0) Encodes a transcription factor... | 0.03 | Orthogroups_2024-Update | |
PSME_00039002-RA | No alias | (at5g26170 : 112.0) member of WRKY Transcription Factor;... | 0.03 | Orthogroups_2024-Update | |
PSME_00040311-RA | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
PSME_00041689-RA | No alias | (at1g29860 : 111.0) member of WRKY Transcription Factor;... | 0.02 | Orthogroups_2024-Update | |
PSME_00047222-RA | No alias | (at4g04450 : 178.0) member of WRKY Transcription Factor;... | 0.03 | Orthogroups_2024-Update | |
Potri.008G091900 | No alias | WRKY DNA-binding protein 4 | 0.03 | Orthogroups_2024-Update | |
Sobic.001G381300.1 | No alias | WRKY-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Sobic.002G202700.1 | No alias | WRKY-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Solyc04g051690 | No alias | WRKY transcription factor 51 | 0.03 | Orthogroups_2024-Update | |
Solyc04g072070 | No alias | WRKY transcription factor 55 | 0.03 | Orthogroups_2024-Update | |
Solyc08g067360 | No alias | WRKY transcription factor 45 | 0.03 | Orthogroups_2024-Update | |
Sopen08g021290 | No alias | WRKY DNA -binding domain | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | 16Dec |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | 16Dec |
MF | GO:0043565 | sequence-specific DNA binding | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
BP | GO:0005991 | trehalose metabolic process | IEP | Predicted GO |
BP | GO:0005992 | trehalose biosynthetic process | IEP | Predicted GO |
BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
MF | GO:0015276 | ligand-gated ion channel activity | IEP | Predicted GO |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Predicted GO |
MF | GO:0017069 | snRNA binding | IEP | Predicted GO |
MF | GO:0017070 | U6 snRNA binding | IEP | Predicted GO |
MF | GO:0022834 | ligand-gated channel activity | IEP | Predicted GO |
MF | GO:0022836 | gated channel activity | IEP | Predicted GO |
MF | GO:0022839 | ion gated channel activity | IEP | Predicted GO |
MF | GO:0030623 | U5 snRNA binding | IEP | Predicted GO |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | Predicted GO |
MF | GO:0051213 | dioxygenase activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003657 | WRKY_dom | 212 | 268 |
No external refs found! |