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  5. Brara.B03520.1

Brara.B03520.1


Description : plant-specific ALOG-type transcription factor


Gene families : OG_42_0000294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03520.1
Cluster HCAA Clusters: Cluster_321

Target Alias Description ECC score Gene Family Method Actions
A4A49_23960 No alias protein light-dependent short hypocotyls 4 0.03 Orthogroups_2024-Update
A4A49_27404 No alias protein light-dependent short hypocotyls 3 0.02 Orthogroups_2024-Update
GRMZM2G147241 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update
Glyma.06G315400 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Glyma.13G290600 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Glyma.20G223100 No alias Protein of unknown function (DUF640) 0.04 Orthogroups_2024-Update
Potri.004G057300 No alias Protein of unknown function (DUF640) 0.04 Orthogroups_2024-Update
Potri.011G156600 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Seita.1G239200.1 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G219400.1 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G170100.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
Sopen06g035260 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006936 ALOG_dom 16 138
No external refs found!