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  5. At1g80810

At1g80810


Description : Tudor/PWWP/MBT superfamily protein [Source:TAIR;Acc:AT1G80810]


Gene families : OG_42_0000994 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000994_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g80810
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
A4A49_05432 No alias dna mismatch repair protein msh6 0.03 Orthogroups_2024-Update
Bradi2g57070 No alias Function unknown 0.03 Orthogroups_2024-Update
Bradi5g14790 No alias binding 0.02 Orthogroups_2024-Update
Glyma.04G061700 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.06G062600 No alias Function unknown 0.04 Orthogroups_2024-Update
Seita.1G230900.1 No alias cohesin cofactor *(PDS5) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005856 cytoskeleton IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!