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  5. Brara.B03610.1

Brara.B03610.1


Description : MYB class-R2R3 subgroup-13 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03610.1
Cluster HCAA Clusters: Cluster_325

Target Alias Description ECC score Gene Family Method Actions
A4A49_12677 No alias myb-related protein pp2 0.03 Orthogroups_2024-Update
At1g06180 No alias Transcription factor MYB13... 0.03 Orthogroups_2024-Update
At3g24310 No alias MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5] 0.02 Orthogroups_2024-Update
Bradi1g64687 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
Bradi3g49190 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Bradi5g15760 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Brara.K01188.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.11G107100 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
HORVU1Hr1G051980.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU1Hr1G074260.1 No alias MYB class-R2R3 subgroup-4 transcription factor & MYB... 0.02 Orthogroups_2024-Update
HORVU7Hr1G041810.5 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
LOC_Os12g03150 No alias myb-like DNA-binding domain containing protein,... 0.03 Orthogroups_2024-Update
MA_316475g0010 No alias (at4g38620 : 216.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00010957-RA No alias (at3g61250 : 269.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00019912-RA No alias (at5g49620 : 209.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00036696-RA No alias (at5g16770 : 208.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00039845-RA No alias (at4g38620 : 241.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00043973-RA No alias (at1g22640 : 191.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00050636-RA No alias (p20025|myb38_maize : 262.0) Myb-related protein Zm38 -... 0.03 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.03 Orthogroups_2024-Update
PSME_00051920-RA No alias (at5g57620 : 234.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
Potri.009G027300 No alias myb domain protein 48 0.03 Orthogroups_2024-Update
Potri.013G056500 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Potri.013G148600 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Pp1s204_13V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.5G239400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G209300.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G178300.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sopen05g003580 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen12g033830 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
evm.model.contig_2173.15 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Predicted GO
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0046039 GTP metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
MF GO:0061650 ubiquitin-like protein conjugating enzyme activity IEP Predicted GO
MF GO:0061657 UFM1 conjugating enzyme activity IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
MF GO:0071568 UFM1 transferase activity IEP Predicted GO
BP GO:0071569 protein ufmylation IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 110
No external refs found!