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  5. Brara.B03649.1

Brara.B03649.1


Description : deubiquitinase


Gene families : OG_42_0000597 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000597_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03649.1
Cluster HCAA Clusters: Cluster_316

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G063800 No alias PPPDE putative thiol peptidase family protein 0.05 Orthogroups_2024-Update
Sobic.001G468500.1 No alias deubiquitinase 0.04 Orthogroups_2024-Update
Sopen12g002850 No alias PPPDE putative peptidase domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
CC GO:1902495 transmembrane transporter complex IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
CC GO:1990351 transporter complex IEP Predicted GO
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 19 154
No external refs found!