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  5. Brara.B03687.1

Brara.B03687.1


Description : Unknown function


Gene families : OG_42_0006328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006328_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03687.1
Cluster HCAA Clusters: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
Seita.2G121700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
evm.model.tig00021073.61 No alias (at2g44900 : 115.0) ARABIDILLO-1 and its homolog,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
BP GO:0006139 nucleobase-containing compound metabolic process IEA 16Dec
MF GO:0008408 3'-5' exonuclease activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002782 Mut7-C_RNAse_dom 335 491
IPR002562 3'-5'_exonuclease_dom 9 198
No external refs found!