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  5. Brara.B03701.1

Brara.B03701.1


Description : anion channel *(SLAC)


Gene families : OG_42_0000546 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000546_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03701.1
Cluster HCAA Clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
A4A49_12079 No alias s-type anion channel slah3 0.05 Orthogroups_2024-Update
A4A49_34710 No alias s-type anion channel slah1 0.03 Orthogroups_2024-Update
Bradi2g15500 No alias SLAC1 homologue 2 0.05 Orthogroups_2024-Update
Brara.I01179.1 No alias anion channel *(SLAC) 0.03 Orthogroups_2024-Update
GRMZM2G080887 No alias SLAC1 homologue 2 0.03 Orthogroups_2024-Update
GRMZM2G331393 No alias SLAC1 homologue 2 0.03 Orthogroups_2024-Update
Pp1s78_52V6 No alias tellurite resistance protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
CC GO:0000813 ESCRT I complex IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR004695 Voltage-dep_anion_channel 265 568
No external refs found!