Brara.B03778.1

Description : subgroup ERF-X transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.B03778.1
Cluster	HCAA Clusters: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
A4A49_24642	No alias	ethylene-responsive transcription factor rap2-11	0.02	Orthogroups_2024-Update
A4A49_28228	No alias	ethylene-responsive transcription factor erf017	0.02	Orthogroups_2024-Update
A4A49_42088	No alias	ethylene-responsive transcription factor 13	0.02	Orthogroups_2024-Update
A4A49_42290	No alias	ethylene-responsive transcription factor rap2-4	0.02	Orthogroups_2024-Update
At2g44940	No alias	Ethylene-responsive transcription factor ERF034...	0.02	Orthogroups_2024-Update
Bradi3g41543	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi3g60120	No alias	related to AP2 12	0.03	Orthogroups_2024-Update
Brara.A01769.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Brara.B02302.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Brara.I02948.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.J00420.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.J02507.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G080516	No alias	ethylene responsive element binding factor 1	0.04	Orthogroups_2024-Update
GRMZM2G084264	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.04G067200	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.12G203100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.18G018200	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
HORVU6Hr1G062430.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
LOC_Os04g52090	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_10274g0010	No alias	(at5g13330 : 108.0) encodes a member of the ERF...	0.04	Orthogroups_2024-Update
MA_426919g0010	No alias	(at1g19210 : 109.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00034722-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
Pp1s259_94V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Pp1s64_47V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G257300.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Seita.1G257600.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Seita.7G205100.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Sobic.001G169400.2	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.03	Orthogroups_2024-Update
Sobic.001G481600.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.001G531100.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Sopen03g033540	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen07g033090	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005875	microtubule associated complex	IEP	Predicted GO
BP	GO:0007017	microtubule-based process	IEP	Predicted GO
BP	GO:0008285	negative regulation of cell proliferation	IEP	Predicted GO
CC	GO:0030286	dynein complex	IEP	Predicted GO
BP	GO:0042127	regulation of cell proliferation	IEP	Predicted GO
CC	GO:0044430	cytoskeletal part	IEP	Predicted GO
BP	GO:0048519	negative regulation of biological process	IEP	Predicted GO
BP	GO:0048523	negative regulation of cellular process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	85	134

External Links

No external refs found!

Brara.B03778.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation