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  5. Brara.B03845.1

Brara.B03845.1


Description : Unknown function


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03845.1
Cluster HCAA Clusters: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
A4A49_40482 No alias 4-coumarate--coa ligase 1 0.03 Orthogroups_2024-Update
At3g21240 No alias Cinnamyl alcohol dehydrogenase... 0.04 Orthogroups_2024-Update
LOC_Os02g08100 No alias AMP-binding domain containing protein, expressed 0.05 Orthogroups_2024-Update
LOC_Os03g05780 No alias 4-coumarate--CoA ligase-like 7, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00013808-RA No alias (at1g20510 : 243.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
PSME_00013809-RA No alias (at1g20510 : 678.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
PSME_00019640-RA No alias (at1g20510 : 494.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
PSME_00022472-RA No alias (at1g20510 : 519.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
Pp1s20_346V6 No alias 4-coumarate: ligase 0.03 Orthogroups_2024-Update
Sobic.004G062500.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Sopen03g027780 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update
Sopen06g025930 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update
evm.model.contig_2122.5 No alias (q42982|4cl2_orysa : 375.0) 4-coumarate--CoA ligase 2... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 68 454
IPR025110 AMP-bd_C 463 538
No external refs found!