1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.B03869.1

Brara.B03869.1


Description : amino acid transporter *(AAP)


Gene families : OG_42_0000170 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03869.1
Cluster HCAA Clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
At1g58360 No alias NAT2 [Source:UniProtKB/TrEMBL;Acc:A0A178WEG7] 0.04 Orthogroups_2024-Update
At5g23810 No alias Probable amino acid permease 7... 0.03 Orthogroups_2024-Update
At5g49630 No alias AAP6 [Source:UniProtKB/TrEMBL;Acc:A0A178UHU7] 0.03 Orthogroups_2024-Update
Bradi4g23350 No alias amino acid permease 2 0.02 Orthogroups_2024-Update
Bradi5g13047 No alias amino acid permease 2 0.03 Orthogroups_2024-Update
Brara.F02266.1 No alias amino acid transporter *(AAP) 0.04 Orthogroups_2024-Update
Brara.G03513.1 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
Brara.I05240.1 No alias amino acid transporter *(AAP) 0.04 Orthogroups_2024-Update
GRMZM2G082434 No alias amino acid permease 2 0.03 Orthogroups_2024-Update
GRMZM2G332505 No alias amino acid permease 2 0.04 Orthogroups_2024-Update
Glyma.04G246400 No alias amino acid permease 3 0.03 Orthogroups_2024-Update
Glyma.06G116400 No alias amino acid permease 3 0.03 Orthogroups_2024-Update
Glyma.18G071900 No alias amino acid permease 7 0.03 Orthogroups_2024-Update
MA_10428859g0010 No alias (at1g77380 : 347.0) Amino acid permease which transports... 0.02 Orthogroups_2024-Update
MA_402129g0010 No alias (at1g77380 : 596.0) Amino acid permease which transports... 0.04 Orthogroups_2024-Update
Mp6g14130.1 No alias amino acid transporter (AAP) 0.01 Orthogroups_2024-Update
PSME_00013339-RA No alias (at5g63850 : 503.0) Amino acid transporter whose... 0.03 Orthogroups_2024-Update
PSME_00018222-RA No alias (at5g09220 : 667.0) member of AAAP family; amino acid... 0.02 Orthogroups_2024-Update
PSME_00047245-RA No alias (at1g77380 : 338.0) Amino acid permease which transports... 0.02 Orthogroups_2024-Update
Potri.005G181600 No alias amino acid permease 3 0.04 Orthogroups_2024-Update
Potri.009G085000 No alias amino acid permease 6 0.03 Orthogroups_2024-Update
Pp1s107_87V6 No alias amino acid permease 0.02 Orthogroups_2024-Update
Seita.2G026700.1 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
Seita.5G401000.1 No alias amino acid transporter *(AAP) 0.02 Orthogroups_2024-Update
Sobic.003G378800.1 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
Sobic.005G072300.1 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
Sobic.005G072500.1 No alias amino acid transporter *(AAP) 0.02 Orthogroups_2024-Update
Sobic.007G087400.1 No alias amino acid transporter *(AAP) 0.02 Orthogroups_2024-Update
Sobic.008G059000.1 No alias amino acid transporter *(AAP) 0.01 Orthogroups_2024-Update
Sobic.008G059100.1 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
Solyc04g077050 No alias Amino acid transporter (AHRD V3.3 *** P93561_SOLTU) 0.05 Orthogroups_2024-Update
Sopen06g020230 No alias Transmembrane amino acid transporter protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009092 homoserine metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019346 transsulfuration IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050667 homocysteine metabolic process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 20 453
No external refs found!