Description : MADS/AGL-type transcription factor
Gene families : OG_42_0024032 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.B03929.1 | |
Cluster | HCAA Clusters: Cluster_217 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | 16Dec |
MF | GO:0046983 | protein dimerization activity | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Predicted GO |
MF | GO:0003972 | RNA ligase (ATP) activity | IEP | Predicted GO |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Predicted GO |
BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | Predicted GO |
BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
MF | GO:0008452 | RNA ligase activity | IEP | Predicted GO |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Predicted GO |
CC | GO:0031012 | extracellular matrix | IEP | Predicted GO |
CC | GO:0044421 | extracellular region part | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002100 | TF_MADSbox | 10 | 56 |
No external refs found! |