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  5. Brara.B03976.1

Brara.B03976.1


Description : C2H2-type subclass ZAT transcription factor


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03976.1
Cluster HCAA Clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
A4A49_12201 No alias zinc finger protein zat5 0.03 Orthogroups_2024-Update
A4A49_32244 No alias zinc finger protein zat11 0.04 Orthogroups_2024-Update
Bradi4g09410 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Brara.C00112.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Brara.E00765.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G140033 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.13G333400 No alias C2H2-type zinc finger family protein 0.02 Orthogroups_2024-Update
Glyma.17G236200 No alias salt tolerance zinc finger 0.04 Orthogroups_2024-Update
LOC_Os03g60570 No alias ZOS3-22 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g33540 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os07g40950 No alias ZOS7-12 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
MA_602g0010 No alias (at5g56200 : 91.3) C2H2 type zinc finger transcription... 0.03 Orthogroups_2024-Update
PSME_00015139-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.002G119300 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Potri.009G166200 No alias C2H2-like zinc finger protein 0.04 Orthogroups_2024-Update
Potri.014G017300 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Pp1s286_28V6 No alias cys2 his2 zinc-finger transcription factor 0.02 Orthogroups_2024-Update
Seita.2G373600.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G035000.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G079500.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G330100.1 No alias C2H2-type subclass ZAT transcription factor 0.05 Orthogroups_2024-Update
Sobic.001G330200.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G416200.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!