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  5. Brara.B04002.1

Brara.B04002.1


Description : HD-ZIP I/II-type transcription factor


Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B04002.1
Cluster HCAA Clusters: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
GRMZM5G803812 No alias Homeobox-leucine zipper protein family 0.02 Orthogroups_2024-Update
Glyma.16G021000 No alias homeobox 7 0.03 Orthogroups_2024-Update
LOC_Os10g26500 No alias homeobox associated leucine zipper, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00000008-RA No alias (at1g69780 : 103.0) Encodes a homeodomain leucine zipper... 0.03 Orthogroups_2024-Update
PSME_00014391-RA No alias (at1g69780 : 134.0) Encodes a homeodomain leucine zipper... 0.03 Orthogroups_2024-Update
PSME_00033843-RA No alias (at3g01470 : 181.0) Encodes a homeodomain leucine zipper... 0.03 Orthogroups_2024-Update
Pp1s28_54V6 No alias af402605_1homeodomain leucine zipper protein hdz2 0.02 Orthogroups_2024-Update
Pp1s65_52V6 No alias af402605_1homeodomain leucine zipper protein hdz2 0.03 Orthogroups_2024-Update
Seita.1G253700.1 No alias HD-ZIP I/II-type transcription factor 0.05 Orthogroups_2024-Update
Seita.2G193200.1 No alias HD-ZIP I/II-type transcription factor 0.04 Orthogroups_2024-Update
Seita.6G187700.1 No alias HD-ZIP I/II-type transcription factor 0.05 Orthogroups_2024-Update
Solyc01g096320 No alias Homeobox-leucine zipper protein (AHRD V3.3 *** M4W1Z7_TOBAC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 69 121
No external refs found!