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Description : alpha-class expansin
Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.C00061.1 | |
| Cluster | HCAA Clusters: Cluster_35 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 102623 | No alias | expansin A15 | 0.02 | Orthogroups_2024-Update | |
| A4A49_26789 | No alias | expansin-a3 | 0.02 | Orthogroups_2024-Update | |
| At1g20190 | No alias | Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3] | 0.04 | Orthogroups_2024-Update | |
| At1g26770 | No alias | Expansin A10 [Source:UniProtKB/TrEMBL;Acc:F4HPC1] | 0.03 | Orthogroups_2024-Update | |
| At5g05290 | No alias | Expansin-A2 [Source:UniProtKB/Swiss-Prot;Acc:Q38866] | 0.04 | Orthogroups_2024-Update | |
| Brara.I01201.1 | No alias | alpha-class expansin | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G094523 | No alias | expansin A1 | 0.03 | Orthogroups_2024-Update | |
| Glyma.02G235900 | No alias | expansin A8 | 0.02 | Orthogroups_2024-Update | |
| Glyma.06G021700 | No alias | expansin 11 | 0.06 | Orthogroups_2024-Update | |
| Glyma.06G143300 | No alias | expansin A8 | 0.05 | Orthogroups_2024-Update | |
| Glyma.06G195000 | No alias | expansin A15 | 0.03 | Orthogroups_2024-Update | |
| Glyma.15G037700 | No alias | expansin A4 | 0.03 | Orthogroups_2024-Update | |
| Glyma.18G265400 | No alias | expansin A23 | 0.04 | Orthogroups_2024-Update | |
| Glyma.20G033900 | No alias | expansin A15 | 0.03 | Orthogroups_2024-Update | |
| Kfl00093_0150 | kfl00093_0150_v1.1 | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
| LOC_Os01g60770 | No alias | expansin precursor, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os02g51040 | No alias | expansin precursor, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os04g15840 | No alias | expansin precursor, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_172610g0010 | No alias | (at2g40610 : 331.0) member of Alpha-Expansin Gene... | 0.03 | Orthogroups_2024-Update | |
| MA_40314g0010 | No alias | (q40636|expa2_orysa : 396.0) Expansin-A2 precursor... | 0.04 | Orthogroups_2024-Update | |
| Mp1g22730.1 | No alias | alpha-class expansin | 0.03 | Orthogroups_2024-Update | |
| Mp1g24230.1 | No alias | alpha-class expansin | 0.03 | Orthogroups_2024-Update | |
| Mp4g06560.1 | No alias | alpha-class expansin | 0.02 | Orthogroups_2024-Update | |
| PSME_00009798-RA | No alias | (at1g69530 : 350.0) Member of Alpha-Expansin Gene... | 0.02 | Orthogroups_2024-Update | |
| PSME_00014026-RA | No alias | (at1g69530 : 221.0) Member of Alpha-Expansin Gene... | 0.03 | Orthogroups_2024-Update | |
| PSME_00018428-RA | No alias | (q40636|expa2_orysa : 402.0) Expansin-A2 precursor... | 0.04 | Orthogroups_2024-Update | |
| PSME_00052085-RA | No alias | (at1g69530 : 372.0) Member of Alpha-Expansin Gene... | 0.02 | Orthogroups_2024-Update | |
| PSME_00055878-RA | No alias | (at5g02260 : 159.0) member of Alpha-Expansin Gene... | 0.02 | Orthogroups_2024-Update | |
| Potri.001G401700 | No alias | expansin 12 | 0.03 | Orthogroups_2024-Update | |
| Seita.5G044100.1 | No alias | alpha-class expansin | 0.04 | Orthogroups_2024-Update | |
| Sopen03g034870 | No alias | Pollen allergen | 0.04 | Orthogroups_2024-Update | |
| Sopen04g035500 | No alias | Pollen allergen | 0.02 | Orthogroups_2024-Update | |
| Sopen06g017810 | No alias | Rare lipoprotein A (RlpA)-like double-psi beta-barrel | 0.03 | Orthogroups_2024-Update | |
| Sopen09g005600 | No alias | Pollen allergen | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003779 | actin binding | IEP | Predicted GO |
| MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | Predicted GO |
| MF | GO:0004525 | ribonuclease III activity | IEP | Predicted GO |
| MF | GO:0005102 | signaling receptor binding | IEP | Predicted GO |
| BP | GO:0006298 | mismatch repair | IEP | Predicted GO |
| BP | GO:0006541 | glutamine metabolic process | IEP | Predicted GO |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | Predicted GO |
| MF | GO:0008083 | growth factor activity | IEP | Predicted GO |
| BP | GO:0008283 | cell proliferation | IEP | Predicted GO |
| MF | GO:0008430 | selenium binding | IEP | Predicted GO |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Predicted GO |
| CC | GO:0016020 | membrane | IEP | Predicted GO |
| MF | GO:0016211 | ammonia ligase activity | IEP | Predicted GO |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Predicted GO |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Predicted GO |
| MF | GO:0030545 | receptor regulator activity | IEP | Predicted GO |
| MF | GO:0030983 | mismatched DNA binding | IEP | Predicted GO |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Predicted GO |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0048018 | receptor ligand activity | IEP | Predicted GO |
| No external refs found! |