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  5. Brara.C00098.1

Brara.C00098.1


Description : Fasciclin-type arabinogalactan protein


Gene families : OG_42_0000509 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00098.1
Cluster HCAA Clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
55113 No alias FASCICLIN-like arabinogalactan protein 8 0.03 Orthogroups_2024-Update
A4A49_07465 No alias fasciclin-like arabinogalactan protein 11 0.06 Orthogroups_2024-Update
A4A49_28632 No alias fasciclin-like arabinogalactan protein 12 0.05 Orthogroups_2024-Update
Bradi2g00220 No alias FASCICLIN-like arabinogalactan-protein 11 0.04 Orthogroups_2024-Update
Bradi2g16560 No alias FASCICLIN-like arabinogalactan protein 13 precursor 0.06 Orthogroups_2024-Update
Bradi2g16570 No alias FASCICLIN-like arabinogalactan-protein 11 0.04 Orthogroups_2024-Update
Bradi2g46120 No alias FASCICLIN-like arabinogalactan-protein 11 0.03 Orthogroups_2024-Update
GRMZM2G051185 No alias FASCICLIN-like arabinogalactan 6 0.02 Orthogroups_2024-Update
Glyma.05G162000 No alias FASCICLIN-like arabinogalactan-protein 11 0.04 Orthogroups_2024-Update
HORVU1Hr1G087570.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU3Hr1G018810.2 No alias Fasciclin-type arabinogalactan protein 0.05 Orthogroups_2024-Update
MA_309953g0010 No alias (at2g04780 : 108.0) fasciclin-like... 0.04 Orthogroups_2024-Update
Potri.006G129200 No alias FASCICLIN-like arabinogalactan-protein 11 0.08 Orthogroups_2024-Update
Potri.015G129400 No alias FASCICLIN-like arabinogalactan-protein 11 0.07 Orthogroups_2024-Update
Potri.016G088700 No alias FASCICLIN-like arabinogalactan-protein 11 0.08 Orthogroups_2024-Update
Potri.019G121200 No alias FASCICLIN-like arabinogalactan-protein 11 0.03 Orthogroups_2024-Update
Seita.3G146700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G146800.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Seita.5G263600.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Sobic.003G062000.1 No alias Fasciclin-type arabinogalactan protein 0.04 Orthogroups_2024-Update
Sobic.009G232100.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Solyc09g007660 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen09g002540 No alias Fasciclin domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 41 176
No external refs found!