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  5. Brara.C00209.1

Brara.C00209.1


Description : Unknown function


Gene families : OG_42_0000036 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00209.1
Cluster HCAA Clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
A4A49_21840 No alias peroxidase 4 0.03 Orthogroups_2024-Update
At5g19880 No alias Peroxidase 58 [Source:UniProtKB/Swiss-Prot;Acc:P59120] 0.03 Orthogroups_2024-Update
GRMZM2G133475 No alias Peroxidase superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G134947 No alias Peroxidase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G022800 No alias Peroxidase superfamily protein 0.03 Orthogroups_2024-Update
MA_256822g0010 No alias (p22195|per1_arahy : 418.0) Cationic peroxidase 1... 0.02 Orthogroups_2024-Update
MA_25919g0010 No alias (p22195|per1_arahy : 338.0) Cationic peroxidase 1... 0.02 Orthogroups_2024-Update
MA_66808g0010 No alias (at5g05340 : 378.0) Peroxidase superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00041621-RA No alias (p22195|per1_arahy : 391.0) Cationic peroxidase 1... 0.02 Orthogroups_2024-Update
Potri.013G156500 No alias Peroxidase superfamily protein 0.04 Orthogroups_2024-Update
Solyc11g018800 No alias Peroxidase (AHRD V3.3 *** K4D6T3_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA 16Dec
BP GO:0006979 response to oxidative stress IEA 16Dec
MF GO:0020037 heme binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002016 Haem_peroxidase_pln/fun/bac 47 288
No external refs found!