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  5. Brara.C00243.1

Brara.C00243.1


Description : RAV/NGATHA-type transcription factor


Gene families : OG_42_0000305 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00243.1
Cluster HCAA Clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Glyma.03G199000 No alias AP2/B3-like transcriptional factor family protein 0.03 Orthogroups_2024-Update
Glyma.19G261300 No alias AP2/B3-like transcriptional factor family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G040620.2 No alias RAV/NGATHA-type transcription factor 0.03 Orthogroups_2024-Update
MA_246350g0010 No alias (at1g13260 : 168.0) Encodes an AP2/B3 domain... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
BP GO:0006450 regulation of translational fidelity IEP Predicted GO
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 49 155
No external refs found!