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  5. Brara.C00329.1

Brara.C00329.1


Description : Unknown function


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00329.1
Cluster HCAA Clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g36170 No alias cytokinesis negative regulator RCP1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g04690 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g04590 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_126211g0010 No alias (at5g01980 : 157.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
Potri.006G032100 No alias RING-H2 finger C1A 0.03 Orthogroups_2024-Update
Potri.008G087200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Pp1s295_6V6 No alias protein binding protein 0.03 Orthogroups_2024-Update
Seita.1G304500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G001100.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.004G332500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc03g098590 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G19950.3) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000278 mitotic cell cycle IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 223 268
No external refs found!