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  5. Brara.C00343.1

Brara.C00343.1


Description : circadian clock repression factor *(CHE) & TCP-type transcription factor


Gene families : OG_42_0000261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00343.1
Cluster HCAA Clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
404061 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
A4A49_19852 No alias transcription factor tcp19 0.03 Orthogroups_2024-Update
At5g08330 No alias Transcription factor TCP21... 0.04 Orthogroups_2024-Update
Glyma.06G193000 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.03 Orthogroups_2024-Update
MA_81710g0010 No alias (at2g45680 : 125.0) TCP family transcription factor ;... 0.03 Orthogroups_2024-Update
Seita.1G376200.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 33 171
No external refs found!