Brara.C00455.1

Description : effector receptor *(NLR)

Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C00455.1
Cluster	HCAA Clusters: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
At1g57630	No alias	Disease resistance protein RPP1-WsB, putative...	0.04	Orthogroups_2024-Update
Brara.D00996.1	No alias	effector receptor *(NLR)	0.02	Orthogroups_2024-Update
Brara.I01255.1	No alias	effector receptor *(NLR)	0.03	Orthogroups_2024-Update
Brara.I01803.1	No alias	effector receptor *(NLR)	0.04	Orthogroups_2024-Update
Brara.I01937.1	No alias	effector receptor *(NLR)	0.03	Orthogroups_2024-Update
Glyma.02G076900	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.04	Orthogroups_2024-Update
Glyma.03G053300	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	Orthogroups_2024-Update
Glyma.12G212500	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.04	Orthogroups_2024-Update
Glyma.12G240100	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.02	Orthogroups_2024-Update
Glyma.16G135500	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.04	Orthogroups_2024-Update
Glyma.16G215300	No alias	transmembrane receptors;ATP binding	0.05	Orthogroups_2024-Update
MA_894630g0010	No alias	(at5g36930 : 230.0) Disease resistance protein...	0.02	Orthogroups_2024-Update
PSME_00043800-RA	No alias	(at5g36930 : 119.0) Disease resistance protein...	0.02	Orthogroups_2024-Update
Potri.002G056100	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Potri.006G270000	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	Orthogroups_2024-Update
Potri.011G009250	No alias	transmembrane receptors;ATP binding	0.03	Orthogroups_2024-Update
Potri.011G009400	No alias	transmembrane receptors;ATP binding	0.02	Orthogroups_2024-Update
Potri.011G013201	No alias	transmembrane receptors;ATP binding	0.03	Orthogroups_2024-Update
Potri.017G105000	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.02	Orthogroups_2024-Update
Potri.017G105500	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Potri.T002066	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.05	Orthogroups_2024-Update
Potri.T037800	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	Orthogroups_2024-Update
Potri.T069100	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	Orthogroups_2024-Update
Potri.T074200	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.03	Orthogroups_2024-Update
Potri.T077100	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.02	Orthogroups_2024-Update
Potri.T077532	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.05	Orthogroups_2024-Update
Potri.T127900	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Potri.T129400	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Solyc09g092410	No alias	Disease resistance protein (TIR-NBS-LRR class) family...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0007165	signal transduction	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004506	squalene monooxygenase activity	IEP	Predicted GO
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Predicted GO
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Predicted GO
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	240	471
IPR000157	TIR_dom	57	233
IPR011713	Leu-rich_rpt_3	648	665

External Links

No external refs found!

Brara.C00455.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation