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  5. Brara.C00456.1

Brara.C00456.1


Description : effector receptor *(NLR)


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00456.1
Cluster HCAA Clusters: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
A4A49_16283 No alias tmv resistance protein n 0.04 Orthogroups_2024-Update
A4A49_18484 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
A4A49_34609 No alias tmv resistance protein n 0.04 Orthogroups_2024-Update
At5g17680 No alias Disease resistance protein (TIR-NBS-LRR class)... 0.03 Orthogroups_2024-Update
At5g40100 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
Brara.B02529.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.B02901.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G03158.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.H02179.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.I01255.1 No alias effector receptor *(NLR) 0.05 Orthogroups_2024-Update
Brara.I01803.1 No alias effector receptor *(NLR) 0.04 Orthogroups_2024-Update
Glyma.03G047900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.03G087600 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.06G259150 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.12G132000 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.12G132200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.12G240100 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.05 Orthogroups_2024-Update
Glyma.14G024500 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.14G151100 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.16G128020 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.16G135200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.16G135500 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.16G159100 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Glyma.16G159200 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.16G214585 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.07 Orthogroups_2024-Update
Glyma.16G215300 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
MA_294581g0010 No alias (at5g36930 : 97.4) Disease resistance protein... 0.03 Orthogroups_2024-Update
MA_83092g0010 No alias (at5g36930 : 102.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00006143-RA No alias (at5g36930 : 223.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00008085-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00018710-RA No alias (at1g69550 : 113.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00043800-RA No alias (at5g36930 : 119.0) Disease resistance protein... 0.02 Orthogroups_2024-Update
Potri.001G307300 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.002G056050 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Orthogroups_2024-Update
Potri.005G004200 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.04 Orthogroups_2024-Update
Potri.006G269900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.006G270000 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.011G009250 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Potri.011G009400 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Potri.011G013401 No alias transmembrane receptors;ATP binding 0.04 Orthogroups_2024-Update
Potri.013G097900 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.017G103800 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Potri.019G070300 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Potri.019G070460 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Potri.T002066 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Orthogroups_2024-Update
Potri.T077100 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.T077532 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Pp1s37_60V6 No alias cc-nbs-lrr resistance protein 0.03 Orthogroups_2024-Update
Solyc06g065150 No alias Disease resistance protein N-like protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc12g096880 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.04 Orthogroups_2024-Update
Sopen02g010920 No alias NB-ARC domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA 16Dec
MF GO:0043531 ADP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000157 TIR_dom 60 236
IPR002182 NB-ARC 252 476
IPR011713 Leu-rich_rpt_3 651 670
No external refs found!