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  5. Brara.C00539.1

Brara.C00539.1


Description : Unknown function


Gene families : OG_42_0000144 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00539.1
Cluster HCAA Clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
A4A49_16026 No alias ft-interacting protein 1 0.03 Orthogroups_2024-Update
Bradi3g50990 No alias Calcium-dependent lipid-binding (CaLB domain) plant... 0.03 Orthogroups_2024-Update
Brara.D00264.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.013G107700 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.02 Orthogroups_2024-Update
Pp1s69_195V6 No alias T10K17.90; C2 domain-containing protein [Arabidopsis thaliana] 0.04 Orthogroups_2024-Update
Sobic.004G290300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G343800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen01g003150 No alias Plant phosphoribosyltransferase C-terminal 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 41 133
IPR000008 C2_dom 201 307
IPR000008 C2_dom 362 469
IPR013583 PRibTrfase_C 614 768
No external refs found!